Complete Guide to PDF Security

July 22, 2025
by
Patrick Waldo
Cybersecurity
Blog detail image

Electronic signatures have become the standard on how we sign contracts, approve deals, and conduct business. But there’s a hidden vulnerability, one that can quietly unravel the entire trust model behind digitally signed documents.

This isn’t a bug buried in code. This isn’t a zero day vulnerability. And this isn’t a takedown of any provider, editor or e-sign solution.

It’s simply a design flaw rooted in the PDF format (ISO 32000) and how editor tools interpret security. And it’s exceedingly simple.

How a Simple Annotation Breaks Signature Security

Picture this: you receive a signed contract. Adobe Acrobat shows that reassuring green checkmark, which is a cryptographic seal of authenticity. The document is protected by an AATL certificate (Adobe Approved Trust List), which means it was signed by a trusted organization using vetted cryptographic hardware. All is well. You’ve likely used a major e-sign solution.

Now open that same document in macOS Preview, or similar. Add a square annotation. Maybe highlight a clause. Hit save.

When you reopen the file in Acrobat, something’s missing.

  • The green check is gone
  • The signature panel has vanished
  • The document is now fully editable
  • There is no visible warning that anything changed

This isn’t a sophisticated hack. It’s an everyday action that millions of people could perform without realizing they’ve just broken the chain of trust and removed a security layer.

What’s Really Happening Under the Hood

Behind the scenes, Preview didn’t delete the original content. It added what’s called an incremental update, which is a layer of new data on top of the original PDF. This is entirely within the bounds of the PDF spec.

But Adobe Acrobat sees this modification and, rather than issuing a bright red alert or flagging potential tampering, it simply removes the signature interface. 

Poof. The only indicator that the document was once verified is gone.

What remains is a document that looks fine but is no longer protected. And because the failure is silent, most users will never know.

What Do Electronic Signatures and Certificates Look Like?

Have you ever opened up a signature in a text editor? I’ll see a lot of strange characters and a surprising amount of text. This is PostScript. When you look at an AATL signed document you’ll see information like this, but when an annotation is made it is removed.

Signature Metadata

  • Signature Date
  • Signature Format, ie Adobe PPKLite with ETSI CAdES detached
  • Signature Field Name: "Signature1"

Certificate Information

  • Signer, ie Organization Name, such as UnicornForms, Inc.
  • Email, ie Contact Information 
  • Location: City/State/Country
  • Certificate Authority
  • Certificate Serial

Timestamping Service

  • Provider, ie Timestamping Unit 
  • Timestamp

Document Integrity

  • ByteRange: [0 17674 36198 494]
  • Signature Coverage, ie the signature covers specific byte ranges of the document to ensure integrity
  • Validation Data, ie it includes OCSP responses and certificate chains for offline validation

Technical Details

  • PDF Version, ie 1.7 with digital signature extensions
  • Signature Algorithm, ie RSA with SHA-256 (based on certificate data)
  • Certificate Chain, ie Root CA → Intermediate CA → End Entity Certificate
  • Standards Compliance, ie ETSI CAdES (European standard for advanced digital signatures)

When Security Fails Silently, Trust Fails Loudly

This isn’t just a technical quirk—it’s a systemic problem:

  • Invisible Failures: Most people don’t know to look for a missing green checkmark. There’s no pop-up, no warning, no alert.

  • Fragmented Ecosystem: PDF tools like Preview and Acrobat don’t share a consistent security model. One app’s innocent feature becomes another app’s fatal flaw.

  • Usability vs. Integrity: Users want to highlight, annotate, and share documents. But the tools that allow convenience can also compromise integrity without notice.

Legal Risks When Signatures Disappear

In legal and regulatory environments, the consequences of these silent failures are profound.

Let’s say you’re in a dispute over a signed contract. A lawyer or judge asks: Was this document really signed by the person in question? Has it been modified? If the signature panel is missing, even a cryptographically signed document becomes suspect.

According to U.S. e-signature law, four elements are critical:

  1. Intent to Sign
  2. Consent to Do Business Electronically
  3. Attribution and Association of Signature with the Document
  4. Record Retention

If a document has been modified even accidentally your ability to prove these pillars becomes weaker without understanding how electronic signatures work.

This is in fact why secure signature platforms use cryptography, ie hashing the document and locking it with a trusted certificate. Through a Timestamping Authority (TSA), they record the exact time of the signing, often along with the IP address and geolocation. Think of the hash and the timestamp like fingerprints: if the hash changes, the document has been altered. Simple.

Without this cryptography, you cannot prove the source of trust. You now have two different files with different hashes and no way to prove which is real other than your word. With cryptography and trust services and certificate chains as well as secure record retention, you now have an objective source of truth for the original signed document.

Trust Isn’t a Checkbox; It’s an Ecosystem

This vulnerability is a reminder that digital trust isn’t a toggle. It’s a fragile, interdependent system.

We can’t rely on a green checkmark alone. We need systems that preserve authenticity even when a document leaves our control and that show us, clearly, when something’s gone wrong.

The future of digital documents isn’t perfect integrity. It's a resilient, transparent trust where users, systems, and organizations all know what happened, when it happened, and whether what you’re seeing is what was really signed.

Stay Tuned!

This is just Part 1 of a series on PDF security.

This article is for educational and informational purposes only and does not constitute legal advice. It is intended to raise awareness of PDF security challenges and promote better security practices, not to facilitate document tampering or fraud. Organizations should consult qualified legal and security professionals when implementing or evaluating electronic signature workflows for critical business processes.

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